MyGOD : Visualization and analysis interface for marine genomic observatories data

Charlotte André (1, 2, 3) , Mark Hoebeke (2, 3, 1) , Nicolas Henry (4, 2, 3) , Cyril Noel , Patrick Durand (5) , Erwan Corre (6, 1, 2, 3)

1 ABIMS - ABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science
2 FR2424 - Fédération de recherche de Roscoff
3 SBR - Station biologique de Roscoff = Roscoff Marine Station
4 Florimond Desprez
5 IFREMER - Institut Français de Recherche pour l'Exploitation de la Mer
6 Végétaux marins et biomolécules

Marine Genomics Observatories provide tools and protocols for long-term monitoring of marine ecosystems located in a well-defined and usually limited geographical area, in order to allow the study of their evolution over time. Hence, they yield a significant amount of heterogeneous and complex data (metabarcoding data, “classical” (morphology-base) biodiversity data, supplemental physico-chemical data), which needs to be organized and stored to enable interested parties to carry out downstream analyses. The MyGOD project (Manipulate Your Genomic Observatory Data) aims to explore and interpret the data of genomic observatories projects, by providing an integrated and user-friendly web-based visualization tool.

Keywords: Data Visualisation; Genomic Databases; Genomic Observatories

Domains: Computer Science [cs]; Computer Science [cs]; Bioinformatics [q-bio.QM]; Databases [cs.DB]; Human-Computer Interaction [cs.HC]

Charlotte André, Mark Hoebeke, Nicolas Henry, Cyril Noel, Patrick Durand, et al.. MyGOD : Visualization and analysis interface for marine genomic observatories data. JOBIM 2022, Jul 2022, Rennes, France. ⟨10.5281/zenodo.6451438⟩. ⟨hal-04029627⟩